Dealer called, shes running. No longer blowing fuses. Said that the truck is still throwing the P1605 code though. I asked if they had driven it, see if the trans is in 'limp mode', he said not yet.
He said that the remote start was 'in the way' and they couldn't get to the TCM. Ugh. Does no one add after market stuff? Sorry but it seems like they're using it as an excuse.
Once shes drivable I'm taking her to the shop that installed the remote start and have it removed.